The Borderland Basins off Southern California are semi-isolated sea-floor depressions with connections to each other and to the open Pacific Ocean over narrow sills. A high-resolution, multi-year simulation is analyzed for its currents, stratification, and dissolved oxygen, with a focus on the mean conditions, intrinsic variability, and exchange rates with surrounding waters. The three shallowest, closest basins are given the most attention: Santa Barbara, Santa Monica, and San Pedro. From a combination of multiple means of estimation, the deep basin water mass renewal times are on the order of a year or more, and this time is somewhat shorter in the Santa Barbara Basin than the others.

Eddies play a crucial role in shaping ocean dynamics by affecting material transport, and generating spatio-temporal heterogeneity. However, how eddies at different scales modulate biogeochemical transformation rates remains an open question. Applying a multi-scale decomposition to a numerical simulation, we investigate the respective impact of mesoscale and submesoscale eddies on nutrient transport and biogeochemical cycling in the California Current System. First, the non-linear nature of biological nutrient uptake results in a 50% reduction in primary production in the presence of eddies. Second, eddies shape the vertical transport of nutrients with a strong compensation between mesoscale and submesoscale. Third, the eddy effect on nutrient uptake is controlled by the covariance of temperature, nutrient and phytoplankton fluctuations caused by eddies. Our results shed new light on the tight interaction between non-linear fluid dynamics and ecosystem processes in realistic eddy regimes, highlighting the importance of both mesoscale and submesoscale variability.

Release of iron (Fe) from continental shelves is a major source of this limiting nutrient for phytoplankton in the open ocean, including productive Eastern Boundary Upwelling Systems. The mechanisms governing the transport and fate of Fe along continental margins remain poorly understood, reflecting interaction of physical and biogeochemical processes that are crudely represented by global ocean biogeochemical models. Here, we use a submesoscale-permitting physical-biogeochemical model to investigate processes governing the delivery of shelf-derived Fe to the open ocean along the northern U.S. West Coast. We find that a significant fraction (∼20%) of the Fe released by sediments on the shelf is transported offshore, fertilizing the broader Northeast Pacific Ocean. This transport is governed by two main pathways that reflect interaction between the wind-driven ocean circulation and Fe release by low-oxygen sediments: the first in the surface boundary layer during upwelling events; the second in the bottom boundary layer, associated with pervasive interactions of the poleward California Undercurrent with bottom topography. In the water column interior, transient and standing eddies strengthen offshore transport, counteracting the onshore pull of the mean upwelling circulation. Several hot-spots of intense Fe delivery to the open ocean are maintained by standing meanders in the mean current and enhanced by transient eddies and seasonal oxygen depletion. Our results highlight the importance of fine-scale dynamics for the transport of Fe and shelf-derived elements from continental margins to the open ocean, and the need to improve representation of these processes in biogeochemical models used for climate studies.

The Southern California Bight (SCB), an eastern boundary upwelling system, is impacted by global warming, acidification and deoxygetation, and receives anthropogenic nutrients from a coastal population of 20 million people. We describe the configuration, forcing, and validation of a realistic, submesoscale resolving ocean model as a tool to investigate coastal eutrophication. This modeling system represents an important achievement because it strikes a balance of capturing the forcing by U.S. Pacific Coast-wide phenomena, while representing the bathymetric features and submesoscale circulation that affect the vertical and horizontal transport of nutrients from natural and human sources. Moreover, the model allows to run simulations at timescales that approach the interannual frequencies of ocean variability, making the grand challenge of disentangling natural variability, climate change, and local anthropogenic forcing a tractable task in the near-term. The model simulation is evaluated against a broad suite of observational data throughout the SCB, showing realistic depiction of mean state and its variability with remote sensing and in situ physical-biogeochemical measurements of state variables and biogeochemical rates. The simulation reproduces the main structure of the seasonal upwelling front, the mean current patterns, the dispersion of plumes, as well as their seasonal variability. It reproduces the mean distributions of key biogeochemical and ecosystem properties. Biogeochemical rates reproduced by the model, such as primary productivity and nitrification, are also consistent with measured rates. Results of this validation exercise demonstrate the utility of fine-scale resolution modeling in support of management decisions on local anthropogenic nutrient discharges to coastal zones.

High-resolution simulations by the Regional Ocean Modeling System (ROMS) were used to investigate the dispersal of the San Francisco Bay (SFB) plume over the northern-central California continental shelf during the period of 2011 to 2012. The modeled bulk dynamics of surface currents and state variables showed many similarities to corresponding observations. After entering the Pacific Ocean through the Golden Gate, the SFB plume is dispersed across the shelf via three pathways: (i) along the southern coast towards Monterey Bay, (ii) along the northern coast towards Point Arena, and (iii) an offshore pathway restricted within the shelf break. On the two-year mean timescale, the along-shore zone of impact of the northward-dispersed plume is about 1.5 times longer than that of the southern branch. Due to the opposite surface Ekman transports induced by the northerly or southerly winds, the southern plume branch occupies a broader cross-shore extent, roughly twice as wide as the northern branch which extends roughly two times deeper due to coastal downwelling. Besides these mean characteristics, the SFB plume dispersal also shows considerable temporal variability in response to various forcings, with wind and surface-current forcing most strongly related to the dispersing direction. Applying constituent-oriented age theory, we determine that it can be as long as 50 days since the SFB plume was last in contact with SFB before being flushed away from the Gulf of the Farallones. This study sheds light on the transport and fate of SFB plume and its impact zone with implications for California’s marine ecosystems.

Continental margins play an essential role in global ocean biogeochemistry and the carbon cycle; however, global assessments of this role remain highly uncertain. This uncertainty arises from large variability over a broad range of temporal and spatial scales of the processes that characterize these environments. High-resolution simulations with ocean biogeochemical models have emerged as essential tools to advance biogeochemical assessments at regional scales. Here, we examine the processes and balances for carbon, oxygen, and nitrogen cycles along the U.S. West Coast in an 11-year hindcast simulation with a submesoscale-permitting oceanic circulation-biogeochemical model. We highlight the importance of biogeochemical cycles on the continental shelf, and their connection to the broader regional context encompassing the California Current System. On the shelf, coastal and wind stress curl upwelling drive a vigorous overturning circulation that supports biogeochemical rates and fluxes that are approximately twice as large as offshore. Exchanges with the proximate sediments, submesoscale shelf currents, bottom boundary layer transport, and intensified cross-shelf export of shelf-produced materials impact coastal and open-ocean balances. While regional variability prevents extrapolation of our results to global margins, our approach provides a powerful tool to identify the dominant dynamics in different shelf setting and quantify their large-scale consequences.

Coastal nitrogen (N) enrichment is a global environmental problem that can influence acidification, deoxygenation, and subsequent habitat loss in ways that can be synergistic with global climate change impacts. In the Southern California Bight, an eastern boundary upwelling system, modeling of wastewater discharged through ocean outfalls has shown that it effectively doubles N loading to urban coastal waters. However, effects of wastewater outfalls on biogeochemical rates of primary production and respiration, key processes through which coastal acidification and deoxygenation are manifested, have not been directly linked to observed trends in ambient chlorophyll a, oxygen and pH. In this paper, we compare observations of nutrient concentrations and forms, as well as rates of biogeochemical cycling, in areas within treated wastewater effluent plumes compared to areas spatially distant from ocean outfalls where we expected minimum influence of the plume. We document that wastewater nutrient inputs have an immediate, local effect on nutrient stoichiometry, elevating ammonium and nitrite concentrations by a mean of 4 µM and 0.2 µM, respectively, increasing dissolved nitrogen: phosphorus ratios by a mean of 7 and slightly increasing chlorophyll a by a mean of 1 µg L-1 in the upper 60 m of the watercolumn, as well as increasing rates of nitrification within the plume by a mean of 17 nmol L-1 day-1 and increasing δ13C and δ15N of suspended particulate matter, an integrated measure of primary production, by a mean of 1.3 ‰ and 1 ‰, respectively. We did not observe a significant near plume effect on δ18O and δ15N of the dissolved nitrate+nitrite, an indicator of nitrate+nitrite assimilation into the biomass, instantaneous rates of primary production and respiration, or dissolved oxygen concentration, suggesting any potential impact from wastewater on these is moderated by other factors, notably mixing of water masses. These results indicate that a “reference-area” approach, wherein stations within or near the zone of initial dilution (ZID) from the wastewater outfall are compared to stations farther afield (reference areas) to assess contaminant impacts, may be insufficient to document regional scale impacts of nutrients.

Coastal nitrogen (N) enrichment is a global environmental problem that can influence acidification, deoxygenation, and subsequent habitat loss in ways that can be synergistic with global climate change impacts. In the Southern California Bight, an eastern boundary upwelling system, modeling of wastewater discharged through ocean outfalls has shown that it effectively doubles N loading to urban coastal waters. However, effects of wastewater outfalls on biogeochemical rates of primary production and respiration, key processes through which coastal acidification and deoxygenation are manifested, have not been directly linked to observed trends in ambient chlorophyll a, oxygen and pH. In this paper, we compare observations of nutrient concentrations and forms, as well as rates of nitrification, primary production, and respiration, in areas within treated wastewater effluent plumes compared to areas spatially distant from ocean outfalls where we expected minimum influence of the plume. We document that wastewater nutrient inputs have an immediate, local effect on nutrient stoichiometry, elevating ammonium and nitrite concentrations and increasing dissolved nitrogen: phosphorus ratios, as well as increasing rates of nitrification within the plume. We did not observe a near plume effect on nitrate assimilation into the biomass, primary production, chlorophyll a, respiration, or dissolved oxygen concentration, suggesting any potential impact from wastewater on these processes is moderated by offshore factors, notably mixing of water masses. These results indicate that a “reference-area” approach, wherein stations within or near the zone of initial dilution (ZID) from the wastewater outfall are compared to stations farther afield (reference areas) to assess contaminant impacts, is insufficient to document regional scale impacts of nutrients. Understanding of the complex interactions between local, regional, and global drivers on coastal eutrophication requires coupled observational-numerical modeling approaches where numerical models are carefully validated with observed state and rate data to develop effective, evidence-based solutions to coastal eutrophication.