References
Aliaga Nestares, V. J., Rodriguez Zimmermann, D. F., & Quispe
Gutiérrez, N. (2022). Behavior of ITCZ’ second band near the Peruvian
coast during the 2017 coastal El Niño. Atmósfera .
https://doi.org/10.20937/atm.53017
Allshouse, M. R., Ivey, G. N., Lowe, R. J., Jones, N. L., Beegle-Krause,
C. J., Xu, J., & Peacock, T. (2017). Impact of windage on ocean surface
Lagrangian coherent structures. Environmental Fluid Mechanics ,17 (3). https://doi.org/10.1007/s10652-016-9499-3
Alpert, J. C., M. Kanamitsu, P. M. Caplan, J. G. Sela, and G. H. W.
(1988). Mountain induced gravity wave drag parameterization in the NMC
medium-range forecast model. Numerical Weather Prediction ,
726–733.
Alpert, J. C., Hong, S. Y., & Kim, Y. J. (1996). Sensitivity of
cyclogenesis to lower tropospheric enhancement of gravity wave drag
using the environmental modeling center medium range model.Preprints. 11th Conference on NWP , 19–23.
Andrade-Canto, F., & Beron-Vera, F. J. (2022). Do Eddies Connect the
Tropical Atlantic Ocean and the Gulf of Mexico? Geophysical
Research Letters , 49 (20). https://doi.org/10.1029/2022GL099637
Andrade, C. A., & Barton, E. D. (2000). Eddy development and motion in
the Caribbean Sea. Journal of Geophysical Research: Oceans ,105 (C11). https://doi.org/10.1029/2000jc000300
Appendini, C. M., Hernández-Lasheras, J., Meza-Padilla, R., & Kurczyn,
J. A. (2018). Effect of climate change on wind waves generated by
anticyclonic cold front intrusions in the Gulf of Mexico. Climate
Dynamics , 51 , 3747–3763.
Appendini, C. M., Torres-Freyermuth, A., Salles, P., López-González, J.,
& Mendoza, E. T. (2014). Wave climate and trends for the Gulf of
Mexico: A 30-yr wave hindcast. Journal of Climate , 27 (4),
1619–1632. https://doi.org/10.1175/JCLI-D-13-00206.1
Athié, G., Sheinbaum, J., Candela, J., Ochoa, J., Pérez-Brunius, P., &
Romero-Arteaga, A. (2020). Seasonal variability of the transport through
the yucatan channel from observations. Journal of Physical
Oceanography , 50 (2). https://doi.org/10.1175/JPO-D-18-0269.1
Baums, I. B., Paris, C. B., & Chérubin, L. M. (2006). A
bio-oceanographic filter to larval dispersal in a reef-building coral.Limnology and Oceanography , 51 (5).
https://doi.org/10.4319/lo.2006.51.5.1969
Beron-Vera, F. J., Hadjighasem, A., Xia, Q., Olascoaga, M. J., &
Haller, G. (2019). Coherent Lagrangian swirls among submesoscale
motions. Proceedings of the National Academy of Sciences of the
United States of America , 116 (37).
https://doi.org/10.1073/pnas.1701392115
Beron-Vera, F. J., Olascoaga, M. J., & Goni, G. J. (2008). Oceanic
mesoscale eddies as revealed by Lagrangian coherent structures.Geophysical Research Letters , 35 (12).
https://doi.org/10.1029/2008GL033957
Beron-Vera, F. J., Olascoaga, M. J., Putman, N. F., Triñanes, J., Goni,
G. J., & Lumpkin, R. (2022). Dynamical geography and transition paths
of Sargassum in the tropical Atlantic. AIP Advances ,12 (10). https://doi.org/10.1063/5.0117623
Bleck, R. (2002). An oceanic general circulation model framed in hybrid
isopycnic-Cartesian coordinates. Ocean Modelling , 4 (1).
https://doi.org/10.1016/S1463-5003(01)00012-9
Brink, K. H. (2016). Cross-Shelf Exchange. Annual Review of Marine
Science , 8 (1), 59–78.
https://doi.org/10.1146/annurev-marine-010814-015717
Bryan-Brown, D. N., Brown, C. J., Hughes, J. M., & Connolly, R. M.
(2017). Patterns and trends in marine population connectivity research.
In Marine Ecology Progress Series (Vol. 585).
https://doi.org/10.3354/meps12418
Cao, Y., Li, C., & Dong, C. (2020). Atmospheric cold front-generated
waves in the coastal Louisiana. Journal of Marine Science and
Engineering , 8 (11). https://doi.org/10.3390/jmse8110900
Caviedes, C. N. (1991). Five hundred years of hurricanes in the
Caribbean: Their relationship with global climatic variabilities.GeoJournal , 23 (4). https://doi.org/10.1007/BF00193603
Chassignet, E. P., Smith, L. T., Halliwell, G. R., & Bleck, R. (2003).
North Atlantic simulations with the Hybrid Coordinate Ocean Model
(HYCOM): Impact of the vertical coordinate choice, reference pressure,
and thermobaricity. Journal of Physical Oceanography ,33 (12).
https://doi.org/10.1175/1520-0485(2003)033<2504:NASWTH>2.0.CO;2
Chérubin, L. M., & Richardson, P. L. (2007). Caribbean current
variability and the influence of the Amazon and Orinoco freshwater
plumes. Deep-Sea Research Part I: Oceanographic Research Papers ,54 (9). https://doi.org/10.1016/j.dsr.2007.04.021
Chérubin, L. M., Sturges, W., & Chassignet, E. P. (2005). Deep flow
variabilty in the vicinity of the Yucatan Straits from a high-resolution
numerical simulation. Journal of Geophysical Research: Oceans ,110 (4). https://doi.org/10.1029/2004JC002280
Chou, M. D., Suarez, M. J., Ho, C. H., Yan, M. M. H., & Lee, K. T.
(1998). Parameterizations for cloud overlapping and shortwave
single-scattering properties for use in general circulation and cloud
ensemble models. Journal of Climate , 11 (2).
https://doi.org/10.1175/1520-0442(1998)011<0202:PFCOAS>2.0.CO;2
Clarke, A. J., & Van Gorder, S. (2018). The Relationship of
Near-Surface Flow, Stokes Drift and the Wind Stress. Journal of
Geophysical Research: Oceans , 123 (7).
https://doi.org/10.1029/2018JC014102
Condie, S. A. (1991). Separation and recirculation of the North Brazil
Current. Journal of Marine Research , 49 (1), 1–19.
https://doi.org/10.1357/002224091784968620
Consortium for Data Assimilative Modeling (CDAM). (2015). Hybrid
Coordinate Ocean Model . [Dataset]
https://www.hycom.org/data/glbv0pt08
Cummings, J. A. (2006). Operational multivariate ocean data
assimilation. Quarterly Journal of the Royal Meteorological
Society , 131 (613). https://doi.org/10.1256/qj.05.105
Cummings, J. A., & Smedstad, O. M. (2013). J. A. Cummings and O. M.
Smedstad. 2013: Variational Data Assimilation for the Global Ocean. Data
Assimilation for Atmospheric, Oceanic and Hydrologic Applications vol
II, chapter 13, 303-343. In Data Assimilation for Atmospheric,
Oceanic and Hydrologic Applications: Vol. II .
Data Buoy Cooperation Panel . (1885).
http://www.jcommops.org/dbcp/
De Souza, R. B., & Robinson, I. S. (2004). Lagrangian and satellite
observations of the Brazilian Coastal Current. Continental Shelf
Research , 24 (2). https://doi.org/10.1016/j.csr.2003.10.001
DiMego, G. J., Bosart, L. F., & Endersen, G. W. (1976). An Examination
of the Frequency and Mean Conditions Surrounding Frontal Incursions into
the Gulf of Mexico and Caribbean Sea. Monthly Weather Review ,104 (6), 709–718.
https://doi.org/10.1175/1520-0493(1976)104<0709:aeotfa>2.0.co;2
Döös, K., & Jönsson, B. (2013). TRACMASS—A lagrangian trajectory
model. In Preventive Methods for Coastal Protection: Towards the
Use of Ocean Dynamics for Pollution Control .
https://doi.org/10.1007/978-3-319-00440-2_7
Döös, K., Rupolo, V., & Brodeau, L. (2011). Dispersion of surface
drifters and model-simulated trajectories. Ocean Modelling ,39 (3–4). https://doi.org/10.1016/j.ocemod.2011.05.005
Dow, K. (1999). Caught in the currents: Pollution, risk, and
environmental change in marine space. Professional Geographer ,51 (3). https://doi.org/10.1111/0033-0124.00176
Duran, R., Beron-Vera, F. J., and Olascoaga, M. J. (2019). CIAM
Climatological Isolation and Attraction Model–Climatological Lagrangian
Coherent Structures. Albany: National Energy Technology
Laboratory-Energy Data eXchange; NETL. doi: 10.18141/1558781.
[Software]
https://bitbucket.org/rodu/clcss/src
Duran, R., Beron-Vera, F. J., & Olascoaga, M. J. (2018). Extracting
quasi-steady Lagrangian transport patterns from the ocean circulation:
An application to the Gulf of Mexico. Scientific Reports ,8 (1). https://doi.org/10.1038/s41598-018-23121-y
Duran, R., Nordam, T., Serra, M., & H. Barker, C. (2021). Horizontal
transport in oil-spill modeling. In Marine Hydrocarbon Spill
Assessments: From Baseline Information through to Decision Support
Tools . https://doi.org/10.1016/B978-0-12-819354-9.00004-1
Ek, M. B., Mitchell, K. E., Lin, Y., Rogers, E., Grunmann, P., Koren,
V., Gayno, G., & Tarpley, J. D. (2003). Implementation of Noah land
surface model advances in the National Centers for Environmental
Prediction operational mesoscale Eta model. Journal of Geophysical
Research: Atmospheres , 108 (22).
https://doi.org/10.1029/2002jd003296
Elipot, S., Lumpkin, R., Perez, R. C., Lilly, J. M., Early, J. J., &
Sykulski, A. M. (2016). A global surface drifter data set at hourly
resolution. Journal of Geophysical Research: Oceans ,121 (5). https://doi.org/10.1002/2016JC011716
Fabbroni, N. (2009). Numerical simulations of passive tracers
dispersion in the sea .
Fels, S. B., & Schwarzkopf, M. D. (1975). SIMPLIFIED EXCHANGE
APPROXIMATION: A NEW METHOD FOR RADIATIVE TRANSFER CALCULATIONS.Journal of the Atmospheric Sciences , 32 (7).
https://doi.org/10.1175/1520-0469(1975)032<1475:TSEAAN>2.0.CO;2
Filippi, M., Hadjighasem, A., Rayson, M., Rypina, I. I., Ivey, G., Lowe,
R., Gilmour, J., & Peacock, T. (2021). Investigating transport in a
tidally driven coral atoll flow using Lagrangian coherent structures.Limnology and Oceanography , 66 (11).
https://doi.org/10.1002/lno.11939
García-Martínez, I. M., & Bollasina, M. A. (2020). Sub-monthly
evolution of the Caribbean Low-Level Jet and its relationship with
regional precipitation and atmospheric circulation. Climate
Dynamics , 54 (9–10). https://doi.org/10.1007/s00382-020-05237-y
Garzoli, S. L., Ffield, A., & Yao, Q. (2003). North Brazil Current
rings and the variability in the latitude of retroflection.Elsevier Oceanography Series , 68 (C).
https://doi.org/10.1016/S0422-9894(03)80154-X
Goni, G. J., & Johns, W. E. (2001). A census of North Brazil current
rings observed from TOPEX/POSEIDON altimetry: 1992-1998.Geophysical Research Letters , 28 (1).
https://doi.org/10.1029/2000GL011717
Gordon, A. L. (1967). Circulation of the Caribbean Sea. Journal of
Geophysical Research , 72 (24).
https://doi.org/10.1029/jz072i024p06207
Gough, M. K., Beron-Vera, F. J., Olascoaga, M. J., Sheinbaum, J.,
Jouanno, J., & Duran, R. (2019). Persistent Lagrangian transport
patterns in the northwestern Gulf of Mexico. Journal of Physical
Oceanography , 49 (2). https://doi.org/10.1175/JPO-D-17-0207.1
Gouveia, M. B., Duran, R., Lorenzzetti, J. A., Assireu, A. T., Toste,
R., de, L. P., & Gherardi, D. F. M. (2021). Persistent meanders and
eddies lead to quasi-steady Lagrangian transport patterns in a weak
western boundary current. Scientific Reports , 11 (1).
https://doi.org/10.1038/s41598-020-79386-9
Gower, J., Young, E., & King, S. (2013). Satellite images suggest a new
Sargassum source region in 2011. Remote Sensing Letters ,4 (8), 764–773.
Haffke, C., Magnusdottir, G., Henke, D., Smyth, P., & Peings, Y.
(2016). Daily states of the March-April east Pacific ITCZ in three
decades of high-resolution satellite data. Journal of Climate ,29 (8). https://doi.org/10.1175/JCLI-D-15-0224.1
Haller, G. (2015). Lagrangian Coherent Structures. Annual Review
of Fluid Mechanics , 47 (1), 137–162.
https://doi.org/10.1146/annurev-fluid-010313-141322
Halliwell, G. R. (2004). Evaluation of vertical coordinate and vertical
mixing algorithms in the HYbrid-Coordinate Ocean Model (HYCOM).Ocean Modelling , 7 (3–4).
https://doi.org/10.1016/j.ocemod.2003.10.002
Henke, D., Smyth, P., Haffke, C., & Magnusdottir, G. (2012). Automated
analysis of the temporal behavior of the double Intertropical
Convergence Zone over the east Pacific. Remote Sensing of
Environment , 123 . https://doi.org/10.1016/j.rse.2012.03.022
Hidalgo, H. G., Durán-Quesada, A. M., Amador, J. A., & Alfaro, E. J.
(2015). The caribbean low-level jet, the inter-tropical convergence zone
and precipitation patterns in the intra-Americas Sea: A proposed
dynamical mechanism. Geografiska Annaler, Series A: Physical
Geography , 97 (1). https://doi.org/10.1111/geoa.12085
Holt, J., & Proctor, R. (2008). The seasonal circulation and volume
transport on the northwest European continental shelf: A fine-resolution
model study. Journal of Geophysical Research: Oceans ,113 (6). https://doi.org/10.1029/2006JC004034
Hong, S. Y., & Pan, H. L. (1996). Nonlocal boundary layer vertical
diffusion in a medium-range forecast model. Monthly Weather
Review , 124 (10).
https://doi.org/10.1175/1520-0493(1996)124<2322:NBLVDI>2.0.CO;2
Hong, S. Y., & Pan, H. L. (1998). Convective trigger function for a
mass-flux cumulus parameterization scheme. Monthly Weather
Review , 126 (10).
https://doi.org/10.1175/1520-0493(1998)126<2599:CTFFAM>2.0.CO;2
Hou, Y.-T., Moorthi, S., & Campana, K. (2002). Parameterization of
solar radiation transfer in the NCEP models. In NCEP Office Note(Vol. 441).
Johns, E. M., Lumpkin, R., Putman, N. F., Smith, R. H., Muller-Karger,
F. E., T. Rueda-Roa, D., Hu, C., Wang, M., Brooks, M. T., Gramer, L. J.,
& Werner, F. E. (2020). The establishment of a pelagic Sargassum
population in the tropical Atlantic: Biological consequences of a
basin-scale long distance dispersal event. Progress in
Oceanography , 182 . https://doi.org/10.1016/j.pocean.2020.102269
Johns, E. M., Muhling, B. A., Perez, R. C., Müller-Karger, F. E., Melo,
N., Smith, R. H., Lamkin, J. T., Gerard, T. L., & Malca, E. (2014).
Amazon River water in the northeastern Caribbean Sea and its effect on
larval reef fish assemblages during April 2009. Fisheries
Oceanography , 23 (6). https://doi.org/10.1111/fog.12082
Johns, W. E., Townsend, T. L., Fratantoni, D. M., & Wilson, W. D.
(2002). Erratum: On the Atlantic inflow to the Caribbean Sea (Deep-Sea
Research (2002) 49 (211-243) PII: S0967063701000413). In Deep-Sea
Research Part I: Oceanographic Research Papers (Vol. 49, Issue 7).
https://doi.org/10.1016/S0967-0637(02)00026-2
Johns, W. E., Zantopp, R. J., & Goni, G. J. (2003). Cross-gyre
transport by North Brazil Current rings. Elsevier Oceanography
Series , 68 (C). https://doi.org/10.1016/S0422-9894(03)80156-3
Kurczyn, J. A., Duran, R., Beier, E., & Souza, A. J. (2021). On the
Advection of Upwelled Water on the Western Yucatan Shelf.Frontiers in Marine Science , 8 .
https://doi.org/10.3389/fmars.2021.723452
Kwon, K., Choi, B. J., Kim, K. Y., & Kim, K. (2019). Tracing the
trajectory of pelagic sargassum using satellite monitoring and
lagrangian transport simulations in the East China Sea and Yellow Sea.Algae , 34 (4). https://doi.org/10.4490/algae.2019.34.12.11
Laboratory of Computer and Information Science, Adaptative and
Informatics Research Center . (2015). http://www.cis.hut.fi/somtoolbox/
LaCasce, J. H., & Ohlmann, C. (2003). Relative dispersion at the
surface of the Gulf of Mexico. Journal of Marine Research ,61 (3). https://doi.org/10.1357/002224003322201205
Lago, L. S., Saraceno, M., Martos, P., Guerrero, R. A., Piola, A. R.,
Paniagua, G. F., Ferrari, R., Artana, C. I., & Provost, C. (2019). On
the Wind Contribution to the Variability of Ocean Currents Over Wide
Continental Shelves: A Case Study on the Northern Argentine Continental
Shelf. Journal of Geophysical Research: Oceans , 124 (11).
https://doi.org/10.1029/2019JC015105
Lara-Hernández JA, Enriquez C, Zavala-Hidalgo J, Cuevas E, van
Tussenbroek B, Uribe-Martínez A (2023; under review). Sargassum
transport towards Mexican Caribbean shores: numerical modeling for
research, and forecasting. Journal of Marine Systems
Lara-Hernández, J. A., Zavala-Hidalgo, J., Sanvicente-Añorve, L., &
Briones-Fourzán, P. (2019). Connectivity and larval dispersal pathways
of Panulirus argus in the Gulf of Mexico: A numerical study.Journal of Sea Research , 155 .
https://doi.org/10.1016/j.seares.2019.101814
Large, W. G., Danabasoglu, G., Doney, S. C., & Mcwilliams, J. C.
(1997). Sensitivity to surface forcing and boundary layer mixing in a
global ocean model: Annual-mean climatology. Journal of Physical
Oceanography , 27 (11).
https://doi.org/10.1175/1520-0485(1997)027<2418:STSFAB>2.0.CO;2
Law, K. L., Morét-Ferguson, S., Maximenko, N. A., Proskurowski, G.,
Peacock, E. E., Hafner, J., & Reddy, C. M. (2010). Plastic accumulation
in the North Atlantic subtropical gyre. Science ,329 (5996). https://doi.org/10.1126/science.1192321
Laxague, N. J. M., Özgökmen, T. M., Haus, B. K., Novelli, G.,
Shcherbina, A., Sutherland, P., Guigand, C. M., Lund, B., Mehta, S.,
Alday, M., & Molemaker, J. (2018). Observations of Near-Surface Current
Shear Help Describe Oceanic Oil and Plastic Transport. Geophysical
Research Letters , 45 (1). https://doi.org/10.1002/2017GL075891
Liu, Y., & Weisberg, R. H. (2011). Self Organizing Maps–Applications
and Novel Algorithm Design. InTech. Chap. A review of
self-organizing map applications in meteorology and oceanography ,
253-272. https://doi.org/10.5772/566
Liu, Y., & Weisberg, R. H. (2005). Patterns of ocean current
variability on the West Florida Shelf using the self-organizing map.Journal of Geophysical Research: Oceans , 110 (6).
https://doi.org/10.1029/2004JC002786
Liu, Y., & Weisberg, R. H. (2007). Ocean currents and sea surface
heights estimated across the west Florida shelf. Journal of
Physical Oceanography , 37 (6). https://doi.org/10.1175/JPO3083.1
Liu, Y., Weisberg, R. H., Lenes, J. M., Zheng, L., Hubbard, K., &
Walsh, J. J. (2016). Offshore forcing on the “pressure point” of the
West Florida Shelf: Anomalous upwelling and its influence on harmful
algal blooms. Journal of Geophysical Research: Oceans ,121 (8). https://doi.org/10.1002/2016JC011938
Liu, Y., Weisberg, R. H., & Mooers, C. N. K. (2006). Performance
evaluation of the self-organizing map for feature extraction.Journal of Geophysical Research: Oceans , 111 (5).
https://doi.org/10.1029/2005JC003117
Liu, Y., Weisberg, R. H., Vignudelli, S., & Mitchum, G. T. (2016).
Patterns of the loop current system and regions of sea surface height
variability in the eastern Gulf of Mexico revealed by the
self-organizing maps. Journal of Geophysical Research: Oceans ,121 (4). https://doi.org/10.1002/2015JC011493
Lodise, J., Özgökmen, T., Griffa, A., & Berta, M. (2019). Vertical
structure of ocean surface currents under high winds from massive arrays
of drifters. Ocean Science , 15 (6).
https://doi.org/10.5194/os-15-1627-2019
Lumpkin, R., & Garzoli, S. L. (2005). Near-surface circulation in the
tropical Atlantic Ocean. Deep Sea Research Part I: Oceanographic
Research Papers , 52 (3), 495–518.
Lumpkin, R., Grodsky, S. A., Centurioni, L., Rio, M. H., Carton, J. A.,
& Lee, D. (2013). Removing spurious low-frequency variability in
drifter velocities. Journal of Atmospheric and Oceanic
Technology , 30 (2). https://doi.org/10.1175/JTECH-D-12-00139.1
Lumpkin, R., & Pazos, M. (2007). Measuring surface currents with
SVP drifters: The instrument, its data and some results. Lagrangian
Analysis and Prediction of Coastal and Ocean Dynamics, A. Griffa et al.,
Eds . Cambridge University Press.
Lumpkin, R., & Pazos, M. (2009). Measuring surface currents with
Surface Velocity Program drifters: the instrument, its data, and some
recent results. In Lagrangian Analysis and Prediction of Coastal
and Ocean Dynamics . https://doi.org/10.1017/cbo9780511535901.003
Lynch, D. R., Greenberg, D. A., Bilgili, A., Mc Gillicuddy, D. J.,
Manning, J. P., & Aretxabaleta, A. L. (2015). Particles in the coastal
ocean: Theory and applications. In Particles in the Coastal Ocean:
Theory and Applications . https://doi.org/10.1017/CBO9781107449336
Majda, A. J., & Kramer, P. R. (1999). Simplified models for turbulent
diffusion: Theory, numerical modelling, and physical phenomena. InPhysics Report (Vol. 314, Issue 4).
https://doi.org/10.1016/S0370-1573(98)00083-0
Meza-Padilla, R., Enriquez, C., & Appendini, C. M. (2021). Rapid
assessment tool for oil spill planning and contingencies. Marine
Pollution Bulletin , 166 .
https://doi.org/10.1016/j.marpolbul.2021.112196
Meza-Padilla, R., Enriquez, C., Liu, Y., & Appendini, C. M. (2019).
Ocean Circulation in the Western Gulf of Mexico Using Self-Organizing
Maps. Journal of Geophysical Research: Oceans , 124 (6).
https://doi.org/10.1029/2018JC014377
Müller-Karger, F. E., McClain, C. R., Fisher, T. R., Esaias, W. E., &
Varela, R. (1989). Pigment distribution in the Caribbean sea:
Observations from space. Progress in Oceanography , 23 (1).
https://doi.org/10.1016/0079-6611(89)90024-4
Muller-Karger, F. E., McClain, C. R., & Richardson, P. L. (1988). The
dispersal of the Amazon’s water. Nature , 333 (6168).
https://doi.org/10.1038/333056a0
Muller-Karger, F. E., Richardson, P. L., & Mcgillicuddy, D. (1995). On
the offshore dispersal of the Amazon’s Plume in the North Atlantic:
Comments on the paper by A. Longhurst, “Seasonal cooling and blooming
in tropical oceans.” Deep-Sea Research Part I ,42 (11–12). https://doi.org/10.1016/0967-0637(95)00085-2
National Oceanic and Atmospheric Administration, Atlantic
Oceanographic and Meteorological Laboratory . (2019).
http://www.aoml.noaa.gov/phod/dac/index.php
Okubo, A., & Levin, S. A. (2001). Diffusion and ecological
problems: modern perspectives (Vol. 14). Springer.
Olascoaga, M. J., Beron-Vera, F. J., Brand, L. E., & Koçak, H. (2008).
Tracing the early development of harmful algal blooms on the West
Florida Shelf with the aid of Lagrangian coherent structures.Journal of Geophysical Research: Oceans , 113 (12).
https://doi.org/10.1029/2007JC004533
Olascoaga, M. J., Beron-Vera, F. J., Haller, G., Triñanes, J.,
Iskandarani, M., Coelho, E. F., Haus, B. K., Huntley, H. S., Jacobs, G.,
Kirwan, A. D., Lipphardt, B. L., Özgökmen, T. M., H. M. Reniers, A. J.,
& Valle-Levinson, A. (2013). Drifter motion in the Gulf of Mexico
constrained by altimetric Lagrangian coherent structures.Geophysical Research Letters , 40 (23).
https://doi.org/10.1002/2013GL058624
Olascoaga, M. J., & Haller, G. (2012). Forecasting sudden changes in
environmental pollution patterns. Proceedings of the National
Academy of Sciences of the United States of America , 109 (13).
https://doi.org/10.1073/pnas.1118574109
Olascoaga, M. J., Rypina, I. I., Brown, M. G., Beron-Vera, F. J., Koçak,
H., Brand, L. E., Halliwell, G. R., & Shay, L. K. (2006). Persistent
transport barrier on the West Florida Shelf. Geophysical Research
Letters , 33 (22). https://doi.org/10.1029/2006GL027800
Orfila, A., Urbano-Latorre, C. P., Sayol, J. M., Gonzalez-Montes, S.,
Caceres-Euse, A., Hernández-Carrasco, I., & Muñoz, Á. G. (2021). On the
Impact of the Caribbean Counter Current in the Guajira Upwelling System.Frontiers in Marine Science , 8 .
https://doi.org/10.3389/fmars.2021.626823
Ortiz-Royero, J. C., Otero, L. J., Restrepo, J. C., Ruiz, J., & Cadena,
M. (2013). Cold fronts in the Colombian Caribbean Sea and their
relationship to extreme wave events. Natural Hazards and Earth
System Sciences , 13 (11).
https://doi.org/10.5194/nhess-13-2797-2013
Otero, L. J., Ortiz-Royero, J. C., Ruiz-Merchan, J. K., Higgins, A. E.,
& Henriquez, S. A. (2016). Storms or cold fronts: What is really
responsible for the extreme waves regime in the Colombian Caribbean
coastal region? Natural Hazards and Earth System Sciences ,16 (2). https://doi.org/10.5194/nhess-16-391-2016
Pan, H.-L. H.-L., & Wu, W.-S. W.-S. (1995). Implementing a mass flux
convective parameterization package for the NMC medium-range forecast
model. NMC Office Note , 409 .
Pan, H. L., & Mahrt, L. (1987). Interaction between soil hydrology and
boundary-layer development. Boundary-Layer Meteorology ,38 (1–2). https://doi.org/10.1007/BF00121563
Pohl, F., Eggenhuisen, J. T., Kane, I. A., & Clare, M. A. (2020).
Transport and Burial of Microplastics in Deep-Marine Sediments by
Turbidity Currents. Environmental Science and Technology ,54 (7). https://doi.org/10.1021/acs.est.9b07527
Polzlbauer, G. (2004). Survey and comparison of quality measures for
self-organizing maps. Proceedings of the Fifth Workshop on Data
Analysis (WDA04) .
Putman, N. F., Goni, G. J., Gramer, L. J., Hu, C., Johns, E. M.,
Trinanes, J., & Wang, M. (2018). Simulating transport pathways of
pelagic Sargassum from the Equatorial Atlantic into the Caribbean Sea.Progress in Oceanography , 165 .
https://doi.org/10.1016/j.pocean.2018.06.009
Putman, N. F., Lumpkin, R., Olascoaga, M. J., Trinanes, J., & Goni, G.
J. (2020). Improving transport predictions of pelagic Sargassum.Journal of Experimental Marine Biology and Ecology , 529 .
https://doi.org/10.1016/j.jembe.2020.151398
Rhein, M., Kirchner, K., Mertens, C., Steinfeldt, R., Walter, M., &
Fleischmann-Wischnath, U. (2005). Transport of South Atlantic water
through the passages south of Guadeloupe and across 16°N, 2000-2004.Deep-Sea Research Part I: Oceanographic Research Papers ,52 (12). https://doi.org/10.1016/j.dsr.2005.08.003
Romanou, A., Chassignet, E. P., & Sturges, W. (2004). Gulf of Mexico
circulation within a high-resolution numerical simulation of the North
Atlantic Ocean. Journal of Geophysical Research: Oceans ,109 (1). https://doi.org/10.1029/2003jc001770
Saha, S., Moorthi, S., Pan, H. L., Wu, X., Wang, J., Nadiga, S., Tripp,
P., Kistler, R., Woollen, J., Behringer, D., Liu, H., Stokes, D.,
Grumbine, R., Gayno, G., Wang, J., Hou, Y. T., Chuang, H. Y., Juang, H.
M. H., Sela, J., … Goldberg, M. (2010). The NCEP climate forecast
system reanalysis. Bulletin of the American Meteorological
Society , 91 (8). https://doi.org/10.1175/2010BAMS3001.1
Samelson, R. M. (2013). Lagrangian motion, coherent structures, and
lines of persistent material strain. Annual Review of Marine
Science , 5 . https://doi.org/10.1146/annurev-marine-120710-100819
Sanvicente-Añorve, L., Rubio, S. A.-P., Lemus-Santana, E.,
Allende-Arandía, E., & Zavala-Hidalgo, J. (2019). Distribution of
Hippoidea (Decapoda, Anomura) larvae off Veracruz, southern Gulf of
Mexico: inferences about their migration route. Crustaceana ,92 (5), 585–597. https://doi.org/10.1163/15685403-00003889
Sanvicente-Añorve, L., Zavala-Hidalgo, J., Allende-Arandía, E., &
Hermoso-Salazar, M. (2018). Larval dispersal in three coral reef decapod
species: Influence of larval duration on the metapopulation structure.PLOS ONE , 13 (3), e0193457.
https://doi.org/10.1371/journal.pone.0193457
Sanvicente-Añorve, L., Zavala-Hidalgo, J., Allende-Arandía, M. E., &
Hermoso-Salazar, M. (2014). Connectivity patterns among coral reef
systems in the southern Gulf of Mexico. Marine Ecology Progress
Series , 498 . https://doi.org/10.3354/meps10631
Schwarzkopf, M. D., & Fels, S. B. (1991). The simplified exchange
method revisited: an accurate, rapid method for computation of infrared
cooling rates and fluxes. Journal of Geophysical Research ,96 (D5). https://doi.org/10.1029/89JD01598
Sheng, J., & Tang, L. (2004). A two-way nested-grid ocean-circulation
model for the Meso-American Barrier Reef System. Ocean Dynamics ,54 (2). https://doi.org/10.1007/s10236-003-0074-3
Skliris, N., Marsh, R., Appeaning Addo, K., & Oxenford, H. (2022).
Physical drivers of pelagic sargassum bloom interannual variability in
the Central West Atlantic over 2010–2020. Ocean Dynamics ,72 (6). https://doi.org/10.1007/s10236-022-01511-1
Taubman, S. J., Clough, S. A., Iacono, M. J., Brown, P. D., & Mlawer,
E. J. (1997). Radiative transfer for inhomogeneous atmospheres: RRTM, a
validated correlated-k model for the longwave. Journal of
Geophysical Research: Atmospheres , 102 (D14), 16663–16682.
https://doi.org/10.1029/97jd00237
Vatanen, T., Osmala, M., Raiko,
T., Lagus, K., Sysi-Aho, M., Orešič, M., Honkela, T. and Lähdesmäki, H.
(2015). Self-organization and missing values in SOM and GTM.Neurocomputing , 147, pp.60-70. [Software]
https://doi.org/10.1016/j.neucom.2014.02.061
Vesanto, J., & Alhoniemi, E. (2000). Clustering of the self-organizing
map - Neural Networks, IEEE Transactions on. Ieee Transactions on
Neural Networks , 11 (3).
Vilibić, I., Šepić, J., Mihanović, H., Kalinić, H., Cosoli, S.,
Janeković, I., Žagar, N., Jesenko, B., Tudor, M., Dadić, V., &
Ivanković, D. (2016). Self-Organizing Maps-based ocean currents
forecasting system. Scientific Reports , 6 .
https://doi.org/10.1038/srep22924
Wang, M., & Hu, C. (2017). Predicting Sargassum blooms in the Caribbean
Sea from MODIS observations. Geophysical Research Letters ,44 (7). https://doi.org/10.1002/2017GL072932
Weisberg, R. H., & Liu, Y. (2017). On the Loop Current Penetration into
the Gulf of Mexico. Journal of Geophysical Research: Oceans ,122 (12). https://doi.org/10.1002/2017JC013330
Williams, R. G., & Follows, M. J. (2003). Physical Transport of
Nutrients and the Maintenance of Biological Production. In Ocean
Biogeochemistry . https://doi.org/10.1007/978-3-642-55844-3_3
Wu, X., Moorthi, S., Okamoto, K., & Pan, H. L. (2005). SEA ice impacts
on GFS forecasts at high latitudes. 85th AMS Annual Meeting,
American Meteorological Society - Combined Preprints .
Young-Joon Kim, & Arakawa, A. (1995). Improvement of orographic gravity
wave parameterization using a mesoscale gravity wave model.Journal of the Atmospheric Sciences , 52 (11).
https://doi.org/10.1175/1520-0469(1995)052<1875:ioogwp>2.0.co;2
Zaborska, A., Beszczyńska-Möller, A., & Włodarska-Kowalczuk, M. (2017).
History of heavy metal accumulation in the Svalbard area: Distribution,
origin and transport pathways. Environmental Pollution ,231 . https://doi.org/10.1016/j.envpol.2017.08.042
Zavala-Hidalgo, J., Romero-Centeno, R., Mateos-Jasso, A., Morey, S. L.,
& Martínez-López, B. (2014). The response of the Gulf of Mexico to wind
and heat flux forcing: What has been learned in recent years?Atmósfera , 27 (3), 317–334.
Zeng, X., Li, Y., He, R., & Yin, Y. (2015). Clustering of Loop Current
patterns based on the satellite-observed sea surface height and
self-organizing map. Remote Sensing Letters , 6 (1).
https://doi.org/10.1080/2150704X.2014.998347