Mouradov A, Spangenberg G. Flavonoids: a metabolic network mediating
plants adaptation to their real estate. Front Plant Sci. 2014;5:620.
Waki T, Yoo D, Fujino N, Mameda R, Denessiouk K, Yamashita S,
Motohashi R, Akashi T, Aoki T, Ayabe S, Takahashi S, Nakayama T.
Identification of protein-protein interactions of isoflavonoid
biosynthetic enzymes with 2-hydroxyisoflavanone synthase in soybean
(Glycine max (L.) Merr.). Biochem Biophys Res Commun. 2016;469:546-51.
Mameda R, Waki T, Kawai Y, Takahashi S. Nakayama T. Involvement of
chalcone reductase in the soybean isoflavone metabolon: identification
of GmCHR5, which interacts with 2-hydroxyisoflavanone synthase. Plant
J. 2018;96:86–74.
Waki T, Mameda R, Nakano T, Yamada S, Terashita M, Ito K, Tenma N, Li
Y, Fujino N, Uno K, Yamashita S, Aoki Y, Denessiouk K, Kawai Y,
Sugawara S, Saito K, Yonekura-Sakakibara K, Morita Y, Hoshino A,
Takahashi S, Nakayama T. A conserved strategy of chalcone
isomerase-like protein to rectify promiscuous chalcone synthase
specificity. Nat Commun. 2020;11:870.
Hirata K, Yamashita K, Ueno G, Kawano Y, Hasegawa K, Kumasaka T,
Yamamoto M. ZOO: an automatic data-collection system for
high-throughput structure analysis in protein microcrystallography.
Acta Crystallogr D Struct Biol. 2019;75:138-150.
Yamashita K, Hirata K, Yamamoto M. KAMO: towards automated data
processing for microcrystals. Acta Crystallogr D Struct Biol.
2018;74:441-449.
Winter G, Waterman DG, Parkhurst JM, Brewster AS, Gildea RJ, Gerstel
M, Fuentes-Montero L, Vollmar M, Michels-Clark T, Young ID, Sauter NK,
Evans G. DIALS: implementation and evaluation of a new integration
package. Acta Crystallogr D Struct Biol. 2018;74:85-97.
Kabsch, W. Integration, scaling, space-group assignment and
post-refinement. Acta Cryst D. Biol Crystallogr. 2010;66:125-132.
Vagin A, Teplyakov A. Molecular replacement with MOLREP. Acta
Crystallogr D Biol Crystallogr. 2010;66:22-25.
Emsley P, Lohkamp B, Scott WG, Cowtan K. Features and development of
Coot. Acta Crystallogr D Biol Crystallogr. 2010;66:486-501.
Murshudov GN, Skubák P, Lebedev AA, Pannu NS, Steiner RA, Nicholls RA,
Winn MD, Long F, Vagin AA. REFMAC5 for the refinement of
macromolecular crystal structures. Acta Crystallogr D Biol
Crystallogr. 2011;67:355-67.
The PyMOL Molecular Graphics System, Version 2.0 Schrödinger, LLC.
Tian W, Chen C, Lei X, Zhao J, Liang J. CASTp 3.0: computed atlas of
surface
topography of proteins. Nucleic Acids Res. 2018;46:363-367.
Ferrer JL, Jez JM, Bowman ME, Dixon RA, Noel JP. Structure of chalcone
synthase and the molecular basis of plant polyketide biosynthesis. Nat
Struct Biol. 1999;6:775-84.
Liou G, Chiang YC, Wang Y, Weng JK. Mechanistic basis for the
evolution of chalcone synthase catalytic cysteine reactivity in land
plants. J Biol Chem. 2018;293:18601-18612.